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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2732105 chr8:71923645 A/T XKR9 chr8:71581600-71702606:+ 0.62 5.92 2.57E-7 Box Plot
ACC rs2732106 chr8:71923839 G/A XKR9 chr8:71581600-71702606:+ 0.62 5.92 2.57E-7 Box Plot
ACC rs2732108 chr8:71926099 C/T XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs2732109 chr8:71926223 C/T XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs2732110 chr8:71926811 C/T XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs2732112 chr8:71927841 A/T XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs2732113 chr8:71928549 G/C XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs2732114 chr8:71928712 T/C XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs2732115 chr8:71928854 C/T XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs2732116 chr8:71929327 T/C XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs2742654 chr20:44458533 C/A WFDC3 chr20:44376583-44420571:- 0.68 5.05 5.78E-6 Box Plot
ACC rs2747532 chr20:44385313 A/C WFDC3 chr20:44376583-44420571:- 0.91 6.58 2.32E-8 Box Plot
ACC rs2762 chr5:96273298 C/T ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs27712 chr5:96364063 A/G ERAP2 chr5:96211643-96255420:+ 0.95 11.04 3.1E-15 Box Plot
ACC rs2786685 chr1:245211930 T/C EFCAB2 chr1:245133007-245290466:+ 0.66 5.5 1.19E-6 Box Plot